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SERVICE DESCRIPTION | Bioinformatics and Computational Chemistry research group. Topics: 1. Bioinformatics (Omics based) 2. Computational biology (Cellular based) 3. Computational chemistry (Molecular based) 4. AI, web-based, and High-Performance Computing for Bioinformatics…
- Kst Cibinong (soekarno)
Bioinformatics and Computational Chemistry research group.
Topics:
1. Bioinformatics (Omics based)
2. Computational biology (Cellular based)
3. Computational chemistry (Molecular based)
4. AI, web-based, and High-Performance Computing for Bioinformatics
This MBKM is focused on D4/S1 students and prioritizes those who are familiar with Java/Python/R programming languages, data science/AI, creating web/PHP-based information systems, using HPC, and bioinformatics & molecular modeling tools. Please see the details for each research topic.
Research Details:
1. Bioinformatics (Omics based)
Specification: Computer science, bioinformatics, computational biology, matematika biologi, biologi, kimia, fisika, teknik kimia, teknik fisika, farmasi
Language: Java/Python/R, data science/AI, linux, HPC
- Omics research-related
- NGS & high throughput methods
- Bio-High Performance Computing (Bio-HPC)
- Microarray data analysis
- Multiple sequence alignment (MSA)
- Metagenomics analysis
- Metagenomics analysis
- Translational & clinical bioinformatics
- Viromics, Immunoinformatics
- Bioinformatics in biodiversity & epidemiology
- Precision medicine
- AI, machine learning, and algorithms in bioinformatics
2. Computational biology (Cellular based)
Specification: Computer science, bioinformatics, computational biology/bio(physics), matematika biologi, biologi, kimia, fisika, teknik kimia, teknik fisika, farmasi
Language: Java/Python/R, data science/AI, linux, HPC
- Computational biology
- Systems biology & medicine
- Network biology & pharmacology
- Boolean network model
- Cancer modeling
- Synthetic biology
- Mathematical modeling in biology
- Molecular docking & dynamics
- In silico drug discovery
- Precision medicine
- AI, machine learning, and algorithms in computational biology
3. Computational chemistry (Molecular based)
Specification: Computer science, computational chemistry/physics, kimia, fisika, teknik kimia, teknik fisika, farmasi
Language: Java/Python/R, data science/AI, linux, HPC, quantum computing
- Pemodelan adsorpsi nanosorben & solubility
- Computer-aided drug design
- Pipelining molecular modeling (molecular docking & dynamics)
- Cheminformatics
- Density Functional Theory (DFT)
- Precision medicine
- AI, machine learning, and algorithms in computational chemistry
4. AI, web-based, and High-Performance Computing (HPC) for Bioinformatics
- Pemodelan adsorpsi nanosorben & solubility
- Computer-aided drug design
- Pipelining molecular modeling (molecular docking & dynamics)
- Cheminformatics
- Density Functional Theory (DFT)
- Precision medicine
- AI, machine learning, and algorithms in computational chemistry
4. AI, web-based, and High-Performance Computing (HPC) for Bioinformatics
Specification: Computer science, computational biology, teknik fisika, quantum computing
Language: Web based (PHP (laravel), mongodb, neo4j, javascript, react), Data science/AI/parallel computing (Java/Python/R, linux), HPC/quantum computing
- repository development for sequencing
- knowledge engineering for knowledge-based database
- HPC for bioinformatics analysis
Location: BRIN KST Soekarno - Cibinong
- repository development for sequencing
- knowledge engineering for knowledge-based database
- HPC for bioinformatics analysis
Location: BRIN KST Soekarno - Cibinong
Application Requirements:
- Photo
- File Data Transkrip
- Cover Letter
- Curriculum Vitae
- Statement Letter
- Other Supporting File
- Proposal
